248 On Common Ground » by Wedjatqi ALLIANCE FIC – COMPLETE. Things are going well for Atlantis and the Alliance, with Teyla about to start her first official stay in Atlantis as John's Political Wife, but forces are moving unseen – a Hive seeking vengeance, a horrific prophecy for Halling, and a Genii plot about to unfold.
Stargate: Atlantis, M, English, Sci-Fi & Romance, chapters: 43, words: 322k+, favs: 23, follows: 19, updated: 5/6/2019 published: 8/16/2018
311 Reflections and Conclusions » by Kariesue John and Teyla get ready to welcome their new child. What does life have in store for them now? The finale of my 'R and ' universe. Begins shortly after 'Recreation and Vindication'.
Stargate: Atlantis, M, English, Family & Romance, chapters: 23, words: 115k+, favs: 134, follows: 132, updated: 8/23/2017 published: 8/10/2013, John S., Teyla E.
167 Interlude 3 - Recovery » by Wedjatqi ALLIANCE FIC – As the dust settles following the events of 'Not To Have or To Hold', the Alliance celebrates one of its greatest victories over the Wraith and the start of new relations with Atlantis, but in the Ancient City not everything is so certain. COMPLETE
Stargate: Atlantis, M, English, Romance & Adventure, chapters: 22, words: 131k+, favs: 34, follows: 15, updated: 4/23/2017 published: 4/18/2016, John S., Teyla E., OC
433 Not To Have or To Hold » by Wedjatqi ALLIANCE FIC – As Teyla's wedding day fast approaches, she must tell John and end their affair. But the consequences will be far reaching, significantly affecting the relationship between Atlantis and the Alliance. As this threatens to tear JT apart, the most significant battle against the Wraith is about to begin, while in Atlantis an event shatters the only rest day had in years
Stargate: Atlantis, M, English, Romance & Adventure, chapters: 60, words: 362k+, favs: 35, follows: 16, updated: 10/25/2015 published: 2/8/2015
194 Accidents » by godsdaughter77 John gets in an accident and conflict ensues. John and Rodney both get whumped and its set during the time Elizabeth and Carson still inhabit Atlantis. NOW COMPLETE!
Stargate: Atlantis, T, English, Hurt/Comfort & Angst, chapters: 10, words: 43k+, favs: 111, follows: 108, updated: 7/20/2014 published: 10/16/2008, Rodney M., John S.
39 A Balancing Act » by R. Clowe Atlantis has been idle for months. No attacks. No injuries. No problems. Until one day, Elizabeth has that gnawing feeling...And circumstances become dire for John Sheppard.
Stargate: Atlantis, T, English, chapters: 6, words: 33k+, favs: 20, follows: 36, updated: 6/21/2010 published: 1/1/2008, Elizabeth W., John S.
41 Converted » by domina tempore An AU version of "Conversion", where the retrovirus is not enough... J/T.
Stargate: Atlantis, K+, English, Suspense & Hurt/Comfort, chapters: 10, words: 12k+, favs: 17, follows: 13, updated: 6/15/2010 published: 6/3/2009, Teyla E., John S.
7Darkness Comes » by Emagen Laile John and Merry return to Atlantis to find that something dark is destroying worlds. CURRENTLY BEING REWRITTEN...
Stargate: Atlantis, T, English, Drama & Romance, chapters: 11, words: 22k+, favs: 3, follows: 13, updated: 3/19/2010 published: 12/3/2008, John S.
10Promises by sazz27 John and Ronon discover that there are worse enemies than the Wraith, and John find his loyalties tested beyond anything he'd imagined.
Stargate: Atlantis, T, English, Drama & Adventure, words: 2k+, favs: 5, follows: 18, 10/17/2009, John S., Ronon D.
383 A Time to Heal » by PyroDragon2006 John thought it was over, but when a new presidential advisor and an old enemy both show up on Atlantis, the wounds run deep. Set after Common Ground, so SPOILERS! Now COMPLETE!
Stargate: Atlantis, T, English, Drama & Adventure, chapters: 18, words: 53k+, favs: 195, follows: 132, updated: 8/30/2009 published: 12/14/2006, John S., Rodney M.
229 Evander's Heir II: Dark Mind » by ShepsReyna The continuation of Sheppard story and why his gene is strongest. He develops his abilities further and struggles to contain them. Shepcentric with shep whump, O'Neill makes a return because I love him too. Some profanity/violence.
Stargate: Atlantis, T, English, Hurt/Comfort & Adventure, chapters: 18, words: 95k+, favs: 168, follows: 89, updated: 6/14/2009 published: 9/14/2008, John S.
82 When All Else Fails » by AtlantisJoeFan The continuing story of John Sheppard and Cat. John should have known better that to sit back and enjoy the moment. Life just didn't play out like that.
Stargate: Atlantis, T, English, Angst & Adventure, chapters: 10, words: 39k+, favs: 6, follows: 3, updated: 5/15/2009 published: 3/17/2009, John S.
259 Crossing the Waters » by casus17 Sequel to Cross Jurisdiction. Team NCIS heads to Atlantis and ends up stuck in the middle of a very Atlantean style crisis...Teammate will battle teammate while around them Atlantis itself falls victim to a nasty virus
NCIS & Stargate: Atlantis, T, English, Adventure & Drama, chapters: 26, words: 76k+, favs: 160, follows: 73, updated: 4/26/2009 published: 3/22/2009
99 The Visit » by amsilcox XMenAtlantis crossover with John's father along for the ride. Chapter 15 Operation Backlash is up.
X-Men: The Movie & Stargate: Atlantis, T, English, chapters: 15, words: 55k+, favs: 99, follows: 154, updated: 4/2/2009 published: 11/27/2006, Logan/Wolverine, John S.
97SGA Ficlet Challenges » by MacGateFan This is a collection of Atlantis ficlets I wrote for the LJ comm, ShepsAtlantis. We're on season 5.
Stargate: Atlantis, K+, English, chapters: 84, words: 56k+, favs: 7, follows: 13, updated: 12/30/2008 published: 12/21/2006
185The Grass is Always Greener on the Other Side » by Merlin71 Shep whump post Trio events. Sam returns to the SGC for a few weeks, leaving Shep in charge of Atlantis. Things don't go as planned.
Stargate: Atlantis, T, English, Hurt/Comfort, chapters: 15, words: 46k+, favs: 34, follows: 81, updated: 10/28/2008 published: 2/18/2008
133 Trust » by obsessed1 John and his brother are kidnapped by the Trust and have to escape.
Stargate: Atlantis, K+, English, Angst & Hurt/Comfort, chapters: 8, words: 26k+, favs: 145, follows: 52, updated: 9/15/2008 published: 9/8/2008, John S.
53 Life Altering » by kwillads 4th in series dealing with Sheppard's accident. Following: Three for the Price of Two, Conquering Adversities and Unexpected Surprises. Rated 'T' for some minor bad language.
Stargate: Atlantis, T, English, Drama & Hurt/Comfort, chapters: 14, words: 132k+, favs: 20, follows: 10, updated: 9/14/2008 published: 9/1/2008, John S.
229 On the Road to Come What May » by Eildon Rhymer It started with a strange vessel crashing down from the sky. Then three strangers appeared in a decaying city, willing to risk everything to rescue an injured, imprisoned friend... Outsider viewpoint team fic, with added Shep whump.
Stargate: Atlantis, T, English, Drama & Hurt/Comfort, chapters: 16, words: 102k+, favs: 87, follows: 29, updated: 9/2/2008 published: 8/18/2008, John S.
40The Butterfly Effect » by sparklyshimmer2010 Major Sheppard managed to save Colonel Sumner. He didn't know this one action could affect so many things.
Stargate: Atlantis, K+, English, Adventure & Romance, chapters: 6, words: 19k+, favs: 13, follows: 22, updated: 8/31/2008 published: 6/30/2008, John S., Elizabeth W.