55Feast of the Samhain » by KathainBowen After Ronon starts to slowly turn into a monster by moonlight, Sheppard disappears for six years while searching for a cure. But what happened to break him so badly? Werewolves and whump, oh my!
Stargate: Atlantis, T, English, Horror & Angst, chapters: 23, words: 152k+, favs: 17, follows: 25, updated: 11/7/2013 published: 10/17/2008, John S., Ronon D.
60 The Genius and The SO » by Kajos Sheppard/McKay AU John never had a family. He was military, raised from birth knowing what his future held. He was destined protect and sleep with some genius scientist for his country. What he never expected was to love and be loved. SLASH
Stargate: Atlantis, M, English, Romance & Sci-Fi, chapters: 11, words: 23k+, favs: 91, follows: 90, updated: 10/28/2012 published: 8/10/2010, Rodney M., John S.
21 Circle of the Sun » by Lady Amarra What if Sheppard was the one ending up in the machine in Tao of McKay? What if he ascends but can't stop helping the people of Atlantis? This is the story of his punishment. SGABigBang2008, McShep, Slash not graphic, Warnings: non-graph. PLETE
Stargate: Atlantis, M, English, Drama & Romance, chapters: 17, words: 43k+, favs: 15, follows: 22, updated: 4/29/2012 published: 8/27/2008, John S., Rodney M.
3 Fingers by Ripper101 It takes two days for John to notice Rodney's hands. It takes him a few years more to figure out everything else. Slash. John/ Rodney.
Stargate: Atlantis, K, English, Friendship & Romance, words: 3k+, favs: 12, follows: 3, 2/12/2012, John S., Rodney M.
6 Can't You See by lilyleia78 SG-1 visits Atlantis, and John is decidedly not pleased with the friendship Daniel's trying to strike up with Rodney. McShep
Stargate: Atlantis, K, English, Romance, words: 2k+, favs: 33, follows: 5, 1/2/2012, Rodney M., John S.
4 QED by lilyleia78 John is stuck in the transporter with Keller. Keller tries to pass the time with games. John works on being less of a jerk. Rodney's just trying to get John out. McShep
Stargate: Atlantis, K, English, Drama & Romance, words: 2k+, favs: 25, follows: 4, 11/27/2011, Rodney M., John S.
8 Last Man Picked for the Team by Aetherschreiber A tag for "Hide and Seek." Rodney is feeling a little like a fraud and Sheppard is feeling a little like doing some team-building.
Stargate: Atlantis, K+, English, Friendship, words: 1k+, favs: 14, follows: 2, 9/20/2011, Rodney M., John S.
61Never again » by Natz5 When a standard mission goes horribly wrong, two members of Atlantis are kidnapped. Two weeks later one of them is returned. But at what cost to the Major who still remains missing? Seven months later and they might finally be able to get some answers.
Stargate: Atlantis, T, English, Angst & Hurt/Comfort, chapters: 10, words: 22k+, favs: 28, follows: 64, updated: 9/8/2011 published: 3/25/2010, E. Lorne, Rodney M.
127If Only My Mother Could See Me Now » by miss Kittyplank To Elizabeth's shock and even horror, she is pregnant...no thanks to a certain John Sheppard. The only problem is that John and Elizabeth aren't together. John/Elizabeth eventually. CHAPTER 20 IS UP! PLEASE CHECK IT OUT AND REVIEW!
Stargate: Atlantis, K+, English, Humor & Romance, chapters: 20, words: 42k+, favs: 69, follows: 92, updated: 8/18/2011 published: 9/10/2009, Elizabeth W., John S.
5 Rodney A ReTelling of Roxanne » by PaleoM Basically 'Roxanne' told as a McShep. Hence, this is a Slash AU McShep. This was done for the RomComRama over on dreamwidth in which all Romantic Comedies have been rewritten with our favourite shows and pairings. Het, Gen, Slash. Link in Ch1. Go see.
Stargate: Atlantis, M, English, Romance & Drama, chapters: 13, words: 38k+, favs: 8, follows: 4, 8/11/2011, John S., Rodney M.
26Lullaby » by Meagra Solace After the disaster of the Aructus Project, Rodney is fired. Upon his return to Earth he learns something that will change the course of his live. But will the people of Atlantis be able to cope without the aid of their friend.
Stargate: Atlantis, T, English, Angst, chapters: 8, words: 21k+, favs: 28, follows: 49, updated: 8/10/2011 published: 10/23/2010, Rodney M.
20 Coming Home by casus17 "I know he's in there alone. Alone with his memories, of all his friends from other planets, who are dead, talking to them because he doesn't know how to stop." Futurefic, character deaths... sorry
Stargate: Atlantis, K+, English, Angst & Tragedy, words: 6k+, favs: 19, follows: 2, 7/15/2011, John S.
10 McShep Love Ficlets » by severus-fan Written for the McShep Love community. More will be added as they are written. Unbeta'd.
Stargate: Atlantis, M, English, Romance, chapters: 7, words: 2k+, favs: 13, follows: 4, 7/3/2011, John S., Rodney M.
9Childhood's End » by jenamy "For my sixth grade science fair project I made a model of an atomic bomb." I could hear the awkward silence fill the car for all of three seconds. AU. RM/JS Rated M for later chapters.
Stargate: Atlantis, M, English, Drama, chapters: 11, words: 19k+, favs: 14, follows: 30, updated: 3/28/2011 published: 9/9/2010, John S., Rodney M.
165Adaptation » by sga gatekeeper A collection of one-shots set in my AU Meredithverse, featuring girl!McKay. Will have spoilers for Seasons 1-5. Condensed here for easier reading. New stories beginning on chapter 18. Rating not for all chapters.
Stargate: Atlantis, M, English, Romance, chapters: 39, words: 114k+, favs: 100, follows: 93, updated: 3/14/2011 published: 9/10/2010, Rodney M., John S.
183 Things That Go Whump in the Night » by angstydaydreams John wakes up in the middle of the night with a tummy ache. Shep Whump ensues...
Stargate: Atlantis, T, English, Hurt/Comfort, chapters: 26, words: 70k+, favs: 125, follows: 68, updated: 2/27/2011 published: 3/26/2010, John S., Carson B.
12 Nothing of Anything » by snowglow A new take on an old cliche; Rodney gets transported to another reality and has trouble holding onto himself when nobody believes him. Contains Genderswap. More warnings inside. Rating more for adult subject matter than sex. Sorry.
Stargate: Atlantis, M, English, Drama & Romance, chapters: 7, words: 17k+, favs: 12, follows: 13, 2/5/2011, John S., Rodney M.
3 Giving Thanks by sga gatekeeper A little Thanksgiving fic set in my Meredithverse. Not necessarily a part of the time-line, but can be read as part of the series. John is thankful for Meredith and Meredith's thankful that he's smarter than she gives him credit for.
Stargate: Atlantis, T, English, words: 2k+, favs: 8, follows: 2, 11/24/2010, Rodney M., John S.
5Happy Halloween, Meredith McKay by sga gatekeeper Meredith and John spend Halloween with the Millers. Featuring Always-a-girl!McKay.
Stargate: Atlantis, K, English, Family, words: 2k+, favs: 10, follows: 3, 10/26/2010, Rodney M., John S.
8 Genius Has Its Limits by linda.ljc Summary: John thinks Rodney does something stupid.
Stargate: Atlantis, T, English, Angst, words: 2k+, favs: 43, follows: 6, 10/17/2010, Rodney M., John S.